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	<title>Graduate Algorithms &#187; Lectures</title>
	<atom:link href="http://apollonius.cs.utah.edu/classes/algorithmsf07/category/lectures/feed" rel="self" type="application/rss+xml" />
	<link>http://apollonius.cs.utah.edu/classes/algorithmsf07</link>
	<description>Suresh Venkatasubramanian // MEB 3105 // MW 1045-1205</description>
	<pubDate>Sat, 08 Dec 2007 00:02:26 +0000</pubDate>
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		<title>Lecture 28: Miscellaneous items.</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/12/06/lecture-28-miscellaneous-items/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/12/06/lecture-28-miscellaneous-items/#comments</comments>
		<pubDate>Thu, 06 Dec 2007 06:06:40 +0000</pubDate>
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		<category><![CDATA[Lectures]]></category>

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		<description><![CDATA[Last lecture ! Here are some of the things we covered today:

I talked about computational geometry and output sensitivity. In particular, I mentioned convex hull algorithms, and how to make them optimally output sensitive.
Next, we looked at LP-duality, and how the max-flow min cut theorem can be viewed as a special case of general LP-duality
Online [...]]]></description>
			<content:encoded><![CDATA[<p>Last lecture ! Here are some of the things we covered today:</p>
<ul>
<li>I talked about <a href="http://www.cs.utah.edu/classes/cs5962/">computational geometry</a> and output sensitivity. In particular, I mentioned <a href="http://www.cs.utah.edu/classes/cs5962/lectures/1.pdf">convex hull algorithms</a>, and how to make them <a href="http://www.cs.utah.edu/classes/cs5962/lectures/2.pdf">optimally output sensitive</a>.</li>
<li>Next, we looked at <a href="http://www.cs.utah.edu/classes/cs5962/lectures/11.pdf">LP-duality</a>, and how the max-flow min cut theorem can be viewed as a special case of general LP-duality</li>
<li><a href="http://www.cs.cmu.edu/~avrim/Approx00/">Online algorithms</a> are fun to think about, especially the rent-buy ski problem, and the parking lot problem.</li>
<li>Finally, we looked at <a href="http://compgeom.cs.uiuc.edu/~jeffe/teaching/373/notes/07-amortize.pdf">amortized analysis</a>, and why it&#8217;s good to double every time you reallocate a growing array.</li>
</ul>
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		<title>Lecture 27: Quantum Computing</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/12/03/lecture-27-quantum-computing/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/12/03/lecture-27-quantum-computing/#comments</comments>
		<pubDate>Mon, 03 Dec 2007 09:47:17 +0000</pubDate>
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		<category><![CDATA[Lectures]]></category>

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		<description><![CDATA[Lecture notes for today&#8217;s lecture.
I drew on many sources to cobble together material for this lecture. 

Quantum Computing (lecture notes) by Dave Bacon (the Quantum Pontiff)
Quantum Computation (lecture notes) by Umesh Vazirani
Quantum Computing and Quantum Information, by Nielsen and Chuang.

]]></description>
			<content:encoded><![CDATA[<p><a href="http://apollonius.cs.utah.edu/classes/algorithmsf07/files/2007/12/talk.pdf" title="Lecture notes">Lecture notes</a> for today&#8217;s lecture.</p>
<p>I drew on many sources to cobble together material for this lecture. </p>
<ul>
<li><a href="http://www.cs.washington.edu/education/courses/cse599d/06wi/">Quantum Computing</a> (lecture notes) by Dave Bacon (<a href="http://scienceblogs.com/pontiff/">the Quantum Pontiff</a>)</li>
<li><a href="http://www.cs.berkeley.edu/~vazirani/quantum.html">Quantum Computation</a> (lecture notes) by <a href="http://www.cs.berkeley.edu/~vazirani/">Umesh Vazirani</a></li>
<li><a href="http://www.qinfo.org/qcqi/">Quantum Computing and Quantum Information</a>, by Nielsen and Chuang.</li>
</ul>
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		<title>Lecture 26: Parallel algorithms</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/28/lecture-26-parallel-algorithms/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/28/lecture-26-parallel-algorithms/#comments</comments>
		<pubDate>Wed, 28 Nov 2007 08:49:26 +0000</pubDate>
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		<description><![CDATA[In the early 80s, there was much excitement in the algorithms community about the idea of parallel machine models. The PRAM (parallel RAM), became the analysis model of choice, and in the lecture today, we&#8217;ll start to see the basic theory of parallel complexity as seen on the PRAM. The textbook has no material on [...]]]></description>
			<content:encoded><![CDATA[<p>In the early 80s, there was much excitement in the algorithms community about the idea of parallel machine models. The PRAM (parallel RAM), became the analysis model of choice, and in the lecture today, we&#8217;ll start to see the basic theory of parallel complexity as seen on the PRAM. The textbook has no material on parallel algorithms: I drew much material from <a href="http://www.ida.liu.se/~chrke/courses/APP/ps/f2pram-2x2.pdf">these lecture notes</a>.</p>
<p>Some additional links that might be useful:</p>
<ul>
<li><a href="http://en.wikipedia.org/wiki/Flynn's_taxonomy">Flynn&#8217;s categorization of machine models</a>.</li>
<li><a href="http://en.wikipedia.org/wiki/Amdahl's_law">Amdahl&#8217;s Law</a>.</li>
<li><a href="http://en.wikipedia.org/wiki/P-complete">P-completeness</a></li>
</ul>
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		<title>Lecture 25: (Meta)-Heuristics</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/24/lecture-25-meta-heuristics/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/24/lecture-25-meta-heuristics/#comments</comments>
		<pubDate>Sun, 25 Nov 2007 05:43:42 +0000</pubDate>
		<dc:creator>admin</dc:creator>
		
		<category><![CDATA[Lectures]]></category>

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		<description><![CDATA[When you&#8217;ve shown a problem is NP-hard, and designed whatever approximation you can, and still aren&#8217;t close to solving a problem to the level needed, heuristics are often the next step.
From an algorithms perspective, what distinguishes a heuristic from an algorithm is the lack of formal guarantees.  This deficiency can show up in a [...]]]></description>
			<content:encoded><![CDATA[<p>When you&#8217;ve shown a problem is NP-hard, and designed whatever approximation you can, and still aren&#8217;t close to solving a problem to the level needed, heuristics are often the next step.</p>
<p>From an algorithms perspective, what distinguishes a heuristic from an algorithm is the <em>lack of formal guarantees</em>.  This deficiency can show up in a variety of ways:</p>
<ul>
<li>A heuristic may not have a clear stopping condition</li>
<li>A heuristic will in general not guarantee any kind of quality of solution (except possibly local optimality)</li>
</ul>
<p>If that&#8217;s the case, why use a heuristic ? Usually, it&#8217;s because the problem is too complex to analyse using formal approaches. Also, each problem often requires a completely different method of analysis if we&#8217;re looking at formal guarantees. Heuristics provide a generic approach that can &#8220;work&#8221; on a variety of problems.</p>
<p>Since you can&#8217;t usually evaluate a heuristic via formal methods, the questions you ask about a heuristic are usually different:</p>
<ul>
<li>What is a good stopping criterion ? This is especially tricky for iterative schemes: usually, you want to stop when the difference between the previous solution and the current one falls below some threshold: choosing that threshold is the hard part.</li>
<li>Does the heuristic converge in a &#8220;reasonable amount of time&#8221; ? Many heuristics will make progress very quickly, and spend a lot of time towards the end, as they get closer and closer.</li>
<li>How good do the solutions look ? You will often find silence on this point, mainly because to evaluate the &#8220;goodness&#8221; of a solution, you need some kind of lower bound on the optimal solution, which is also hard to find. Often, there are other ways of evaluating the quality of a solution, depending on the domain.</li>
</ul>
<p>We&#8217;ll look at <em>meta-heuristics</em> in this lecture.  You can think of meta-heuristics as general design principles that can be instantiated for any specific problem, giving an actual heuristic for that problem. Some examples:</p>
<ul>
<li>Local search (also hill climbing, gradient descent)</li>
<li><a href="http://saeta.physics.hmc.edu/Courses/p170/Metropolis.pdf">The Metropolis algorithm</a></li>
<li><a href="http://mathworld.wolfram.com/SimulatedAnnealing.html">Simulated annealing</a>, and some <a href="http://fconyx.ncifcrf.gov/~lukeb/simanf1.html">cooling schedules</a></li>
<li><a href="http://www.ifi.uio.no/infheur/Bakgrunn/Intro_to_TS_Gendreau.htm">Tabu search</a></li>
<li><a href="http://en.wikipedia.org/wiki/Evolutionary_algorithm">Evolutionary algorithms</a>.</li>
</ul>
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		<title>Lecture 24: Sorting Out The Genome</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/20/lecture-24-sorting-out-the-genome/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/20/lecture-24-sorting-out-the-genome/#comments</comments>
		<pubDate>Tue, 20 Nov 2007 06:54:16 +0000</pubDate>
		<dc:creator>admin</dc:creator>
		
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		<description><![CDATA[For this lecture, I&#8217;ll be telling you a story of rearranging the genome, and the influence of algorithms. The tale is told by Brian Hayes, in an  article for American Scientist.
To play a Flash game on signed permutations, click here.
Extra material:

The only paper Bill Gates ever published. (and it&#8217;s on pancake flipping)
A pancake-flipping applet.
Even [...]]]></description>
			<content:encoded><![CDATA[<p>For this lecture, I&#8217;ll be telling you a story of rearranging the genome, and the influence of algorithms. The tale is told by <a href="http://bit-player.org/">Brian Hayes</a>, in an  <a href="http://apollonius.cs.utah.edu/classes/algorithmsf07/files/2007/11/sorting-out-the-genome.pdf" title="genome">article for American Scientist</a>.</p>
<p>To play a Flash game on signed permutations, <a href="https://www.sigmaxi.org/4lane/eneg/Eneg.html">click here</a>.</p>
<p>Extra material:</p>
<ul>
<li><a href="http://www.cs.berkeley.edu/~christos/papers/Bounds%20For%20Sorting%20By%20Prefix%20Reversal.pdf">The only paper Bill Gates ever published</a>. (and it&#8217;s on pancake flipping)</li>
<li>A <a href="http://www.cut-the-knot.org/SimpleGames/Flipper.shtml">pancake-flipping applet</a>.</li>
<li><a href="http://en.wikipedia.org/wiki/Pancake_sorting">Even more</a> on pancake sorting.</li>
</ul>
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		<title>Lecture 23: Probability Amplification</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/19/lecture-23-probability-amplification/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/19/lecture-23-probability-amplification/#comments</comments>
		<pubDate>Tue, 20 Nov 2007 04:56:20 +0000</pubDate>
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		<description><![CDATA[We covered the section on global min cuts in the textbook. In addition, I talked about Chernoff bounds as a method for amplifying the probability of success of an algorithm. Here are some notes on this topic.
I also talked about the power of two choices: the idea that when placing balls in bins, merely choosing [...]]]></description>
			<content:encoded><![CDATA[<p>We covered the section on global min cuts in the textbook. In addition, I talked about Chernoff bounds as a method for amplifying the probability of success of an algorithm. <a href="http://apollonius.cs.utah.edu/classes/algorithmsf07/files/2007/11/chernoff.pdf" title="amplification">Here are some notes</a> on this topic.</p>
<p>I also talked about the power of two choices: the idea that when placing balls in bins, merely choosing two locations at random and picking the better one can lead to an exponential improvement in the maximum load of a bin (from $latex \log{n}$ to $latex \log\log{n}$). A nice survey that reviews this idea (and gives three different proofs of the main theorem) <a href="http://www.cs.umass.edu/~ramesh/Pub/MRS01.pdf">can be found here</a>.</p>
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		<title>Lecture 22: Tail bounds</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/14/lecture-22-tail-bounds/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/14/lecture-22-tail-bounds/#comments</comments>
		<pubDate>Wed, 14 Nov 2007 06:23:32 +0000</pubDate>
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		<description><![CDATA[For this lecture, we will be covering section 13.9 and 13.10 from the textbook. However, we will also consider simpler tail bounds. Some lecture notes on this topic can be found here.
Various books have decent coverage of Markov and Chebyshev bounds: the textbook does NOT cover these bounds.The notes I linked above cover the bounds, [...]]]></description>
			<content:encoded><![CDATA[<p>For this lecture, we will be covering section 13.9 and 13.10 from the textbook. However, we will also consider simpler tail bounds. Some lecture notes on this topic can be found <a href="http://www.cs.utah.edu/classes/cs5962/lectures/19.pdf">here</a>.</p>
<p>Various books have decent coverage of Markov and Chebyshev bounds: the textbook does NOT cover these bounds.The notes I linked above cover the bounds, but not the specific examples relating to occupancy. I have to update my notes, and in the meantime, you can get more information from <a href="http://valis.cs.uiuc.edu/~sariel/teach/05/a/lec/04_occupancy.pdf">these notes</a>.</p>
<p>Two useful textbooks for randomized algorithms in general are:</p>
<ul>
<li><a href="http://books.google.com/books?id=QKVY4mDivBEC&amp;dq=randomized+algorithms&amp;pg=PP1&amp;ots=Ju_iZClcVE&amp;sig=djo7Bty9CXYpNoo8_I6q0EENKVU&amp;prev=http://www.google.com/search%3Fq%3Drandomized%2Balgorithms%26ie%3Dutf-8%26oe%3Dutf-8%26aq%3Dt%26rls%3Dcom.ubuntu:en-US:official%26client%3Dfirefox-a&amp;sa=X&amp;oi=print&amp;ct=title&amp;cad=one-book-with-thumbnail">Randomized Algorithms</a> by Motwani and Raghavan</li>
<li><a href="http://books.google.com/books?id=0bAYl6d7hvkC&amp;dq=probability+and+computing&amp;pg=PP1&amp;ots=olS0tuIeCS&amp;sig=XpljfUyAl5oRKFB62DrZPIfOQtc&amp;prev=http:">Probability and Computing</a> by Mitzenmacher and Upfal.</li>
</ul>
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		<title>Lecture 19: Max flow variants</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/11/lecture-19-max-flow-variants/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/11/lecture-19-max-flow-variants/#comments</comments>
		<pubDate>Mon, 12 Nov 2007 05:34:25 +0000</pubDate>
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		<description><![CDATA[In this lecture, we covered circulations and edges with lower bounds on demands. We also looked at two applications of flows, airline scheduling and image segmentation. All of this material is taken from KT Chapter 7.
]]></description>
			<content:encoded><![CDATA[<p>In this lecture, we covered circulations and edges with lower bounds on demands. We also looked at two applications of flows, airline scheduling and image segmentation. All of this material is taken from KT Chapter 7.</p>
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		<title>Lecture 18: Min cost matchings</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/08/lecture-18-min-cost-matchings/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/11/08/lecture-18-min-cost-matchings/#comments</comments>
		<pubDate>Thu, 08 Nov 2007 20:03:41 +0000</pubDate>
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		<description><![CDATA[The material in this lecture is drawn exclusively from KT Chapter 7.13
]]></description>
			<content:encoded><![CDATA[<p>The material in this lecture is drawn exclusively from KT Chapter 7.13</p>
]]></content:encoded>
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		<title>Lecture 17: The Max-Flow Min-Cut Theorem</title>
		<link>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/10/24/lecture-17-the-max-flow-min-cut-theorem/</link>
		<comments>http://apollonius.cs.utah.edu/classes/algorithmsf07/2007/10/24/lecture-17-the-max-flow-min-cut-theorem/#comments</comments>
		<pubDate>Wed, 24 Oct 2007 06:46:35 +0000</pubDate>
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		<description><![CDATA[Perhaps the most important theorem in the study of flows is the max-flow min-cut theorem, which we will study in today&#8217;s lecture. In addition, we will also see an example application of flows to computing a maximum matching in a bipartite graph, and we will look at more efficient (and polynomial time) algorithms for computing [...]]]></description>
			<content:encoded><![CDATA[<p>Perhaps the most important theorem in the study of flows is the max-flow min-cut theorem, which we will study in today&#8217;s lecture. In addition, we will also see an example application of flows to computing a maximum matching in a bipartite graph, and we will look at more efficient (and polynomial time) algorithms for computing max flows.</p>
<p>Additional reading: Some of the material covered today is best explained in <a href="http://www.cs.uiuc.edu/class/sp07/cs473g/lectures/14-maxflowalgs.pdf" title="Jeff Erickson's notes on max flows">these notes</a>.</p>
<p>Aftermatter:</p>
<ul>
<li><a href="http://www.cs.tau.ac.il/~zwick/">Uri Zwick&#8217;s website</a>: <a href="http://www.cs.tau.ac.il/%7Ezwick/slides/jenga-dag.ppt">Presentation on Jenga</a>, and the <a href="http://www.cs.tau.ac.il/%7Ezwick/papers/jenga-SODA.pdf">paper</a>.</li>
<li><a href="http://bit-player.org/2007/hung-over">An article by Brian Hayes</a> that explains the result on stacking bricks.</li>
</ul>
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